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Computational modelling of mitotic exit in budding yeast: the role of separase and Cdc14 endocycles.

机译:在发芽酵母中的有丝分裂出口的计算模型:Separase和Cdc14内环的作用。

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摘要

The operating principles of complex regulatory networks are best understood with the help of mathematical modelling rather than by intuitive reasoning. Hereby, we study the dynamics of the mitotic exit (ME) control system in budding yeast by further developing the Queralt's model. A comprehensive systems view of the network regulating ME is provided based on classical experiments in the literature. In this picture, Cdc20-APC is a critical node controlling both cyclin (Clb2 and Clb5) and phosphatase (Cdc14) branches of the regulatory network. On the basis of experimental situations ranging from single to quintuple mutants, the kinetic parameters of the network are estimated. Numerical analysis of the model quantifies the dependence of ME control on the proteolytic and non-proteolytic functions of separase. We show that the requirement of the non-proteolytic function of separase for ME depends on cyclin-dependent kinase activity. The model is also used for the systematic analysis of the recently discovered Cdc14 endocycles. The significance of Cdc14 endocycles in eukaryotic cell cycle control is discussed as well.
机译:借助数学建模而不是直观的推理,可以最好地理解复杂监管网络的工作原理。因此,我们通过进一步开发Queralt模型研究了发芽酵母中有丝分裂出口(ME)控制系统的动力学。基于文献中的经典实验,提供了调节ME网络的全面系统视图。在这张照片中,Cdc20-APC是控制调控网络的细胞周期蛋白(Clb2和Clb5)和磷酸酶(Cdc14)分支的关键节点。根据从单突变体到五重突变体的实验情况,估算网络的动力学参数。该模型的数值分析量化了ME控制对Separase的蛋白水解和非蛋白水解功能的依赖性。我们表明,ME的Separase的非蛋白水解功能的要求取决于细胞周期蛋白依赖性激酶活性。该模型还用于对最近发现的Cdc14内循环进行系统分析。还讨论了Cdc14内环在真核细胞周期控制中的重要性。

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